Enzymes & cloning

Plasmid full report (identity + features + unexplained regions)

One combined view of 'what is this plasmid': recognized common features (from plasmid_annotate), backbone identity / possible chimera (from plasmid_identify), and — the two crossed together — any region that neither a curated backbone nor a recognized common feature explains. That last list is a triage signal (an unusual insert, an unannotated part, or worth a closer look), not a defect finding: a real gene-of-interest legitimately has no curated-feature match.

Batchable via POST /batch.

post/plasmid_full_report

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/plasmid_full_report
  • Auth: none required

Request body

sequencestring required

Nucleotide sequence (raw or FASTA; IUPAC accepted).

circularboolean

Treat the query as a circular molecule (most plasmids are).

topNinteger

How many top-ranked backbone candidates to report.

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.