Analysis

Characterize sequence

One-paste 'tell me everything': auto-detects DNA/RNA/protein, then reports composition, ORFs, single-cutter enzymes, end primers or protein properties, plus a BLAST link.

Batchable via POST /batch.

post/characterize_sequence

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/characterize_sequence
  • Auth: none required

Request body

sequencestring required

Nucleotide or protein sequence (raw or FASTA; IUPAC accepted). The alphabet is detected.

minOrfAainteger

Minimum ORF length in amino acids (nucleotide input only).

maxOrfsinteger

Maximum number of ORFs to return, longest first.

endPrimerLengthinteger

Length of the naive end primers taken from each end.

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.