Files & formats

FASTA/FASTQ Stats

Statistics for a FASTA or FASTQ file: count, length distribution, N50, GC content and (FASTQ) mean quality.

post/seqfile_stats

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/seqfile_stats
  • Auth: none required

Request body

inputstring required

FASTA or FASTQ text (raw sequence is treated as single-record FASTA).

qualityOffset33 | 64

ASCII offset of the FASTQ quality string. 33 for anything modern, 64 for pre-1.8 Illumina.

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.