Files & formats

FASTQ Deep QC Report

FastQC-style deep quality-control report for a FASTQ file: per-base quality and content, GC and length distributions, sequence duplication levels, overrepresented sequences, and adapter content — each with a warn/fail verdict against FastQC's own published thresholds.

post/fastq_qc_report

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/fastq_qc_report
  • Auth: none required

Request body

inputstring required

FASTQ text: records of an '@id' header, sequence, '+' separator and quality line (four lines each).

qualityOffset33 | 64

ASCII offset of the FASTQ quality string. 33 for anything modern, 64 for pre-1.8 Illumina.

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.