Proteins & peptides

Poll a protein annotation job

Check an InterProScan job submitted via protein_annotate_submit. Returns {status, ready:false} while still running; once FINISHED, also returns the parsed domain architecture, per-match details, deduplicated GO terms, and topology — the MEMBRANE TOPOLOGY and SIGNAL PEPTIDE that EBI's default run includes (Phobius, TMHMM and SignalP), as {kind, start, end, source} with kind one of signal-peptide / transmembrane / cytoplasmic / non-cytoplasmic. Two predictors reporting nearly the same span are listed separately rather than merged, because a merged boundary is one neither produced. ⚠️ EBI runs every SignalP ORGANISM model whatever the protein is, so a human sequence comes back with gram-positive and gram-negative hits too; the source is named in full on every feature and Phobius — which is organism-agnostic and the only one that returns a full inside/outside topology — sorts first.

post/protein_annotate_poll

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/protein_annotate_poll
  • Auth: none required

Request body

jobIdstring required

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.