Bulk Export

Bulk download mutant peptides as FASTA

Stateless bulk peptide FASTA export. Same filters as /api/export/mutations.csv. Each FASTA header contains the CAN-IMMUNE ID, gene, amino acid change, peptide type, transcript, source, and sample name.

get/export/mutations.fasta

Request

  • Base URL: https://canelib.erc.monash.edu/api
  • URL: https://canelib.erc.monash.edu/api/export/mutations.fasta
  • Auth: none declared

Query parameters

genestring
Example:BRAF

HGNC gene symbol.

tissuestring

OncoTree tissue lineage. Repeat for multiple.

cancer_typestring

Cancer type. Repeat for multiple.

cell_linestring

Cell line name. Repeat for multiple.

project'CL' | 'TS'

Restrict to CL or TS.

qstring

Free text search.

typesstring
Example:mut25,wt25

Peptide types, comma-separated: mut25 (mutant 25-mer), wt25 (wild-type 25-mer), 9mer2 (9-mer mutation at pos 2), 9mer9 (9-mer mutation at pos 9).

unique'1'

Collapse by unique peptide sequence (one entry per distinct sequence).

limitinteger

Maximum mutations to process (cap: 250,000).

Response

FASTA file with peptide sequences.

Changes

No recorded changes to this operation across all 1 revision of this API.