Translation & ORFs

ORF Finder

Find open reading frames (ATG…stop) across all six frames.

Batchable via POST /batch.

post/find_orfs

Request

  • Base URL: https://seqbench.com/api/v1
  • URL: https://seqbench.com/api/v1/find_orfs
  • Auth: none required

Request body

sequencestring required

Nucleotide sequence (raw or FASTA; IUPAC accepted).

minAaLengthinteger

Minimum protein length (aa) to report.

requireStopboolean

Only report ORFs terminated by a stop codon.

limitinteger

How many ORFs to return, longest first. count always reports every ORF found and truncated says whether the list was cut.

Response

Tool ran successfully.

okunknown required
toolstring required

The tool slug that ran.

resultobject required

Tool-specific output object. Its shape depends on the tool — call GET /{tool} or see the docs for each tool's fields.

Example response

{
  "provenance": {
    "apiVersion": "1.1.0"
  }
}

Changes

No recorded changes to this operation across all 1 revision of this API.