PApatsnap
LS Search

B004 Normal Sequence Search

Search sequences with key information.

post/bio-openapi/sequence/job

Request

Request body

limitinteger required

Maximum returned results of each query, support maximum 10,000

query_typestring required

Target Sequence Type. NUCLEOTIDE,PROTEIN

sequence_typestring required

Query Sequence Type. NUCLEOTIDE,PROTEIN

Example request

{
  "database": [
    "ALLPATENT"
  ],
  "limit": 1000,
  "params": {
    "algorithm": "blastn-short",
    "evalue": 100,
    "filter": {
      "perc_identity": {
        "end": 100
      },
      "q_perc_identity": {
        "end": 100
      },
      "qcov_hsp_perc": {
        "end": 100
      },
      "s_perc_identity": {
        "end": 100
      },
      "scov_hsp_perc": {
        "end": 100
      },
      "subject_length": {
        "end": 100
      }
    },
    "word_size": 4
  },
  "query_type": "NUCLEOTIDE",
  "sequence_list": [
    {
      "label": "SEQ1",
      "sequence": "GGGAGGCTAAGGCAGGAG"
    }
  ],
  "sequence_type": "NUCLEOTIDE"
}

Response

Successful b004 normal sequence search response.

statusboolean required

Status

error_msgstring

Error Message

error_codeinteger required

Error Code

Example response

{
  "data": [
    {
      "label": "SEQ1",
      "job_id": "953a406a18d84dc8b13f0b923e406a43",
      "sequence": "GGGAGGCTAAGGCAGGAG"
    }
  ],
  "error_msg": "The request parameter format is incorrect！"
}

Changes

No recorded changes to this operation across all 1 revision of this API.