edit

Upload GWAS summary stats file to the IEU OpenGWAS database

post/edit/upload

Request

  • Base URL: https://api.opengwas.io/api
  • URL: https://api.opengwas.io/api/edit/upload
  • Auth: API key in header Authorization

Query parameters

chr_colinteger required

Column index for chromosome

pos_colinteger required

Column index for base position

ea_colinteger required

Column index for effect allele

oa_colinteger required

Column index for non-effect allele

beta_colinteger required

Column index for effect size

se_colinteger required

Column index for standard error

pval_colinteger required

Column index for P-value

delimiter'comma' | 'tab' | 'space' required

Column delimiter for file

header'True' | 'False' required

Does the file have a header line?

ncase_colinteger

Column index for case sample size

snp_colinteger

Column index for dbsnp rs-identifer

eaf_colinteger

Column index for effect allele frequency

oaf_colinteger

Column index for other allele frequency

imp_z_colinteger

Column number for summary statistics imputation Z score

imp_info_colinteger

Column number for summary statistics imputation INFO score

ncontrol_colinteger

Column index for control sample size; total sample size if continuous trait

idstring required

Identifier to which the summary stats belong.

gzipped'True' | 'False' required

Is the file compressed with gzip?

md5string

MD5 checksum of the uploaded file

nsnpinteger

Number of snps in the uploaded file

Response

Success

Changes

No recorded changes to this operation across all 1 revision of this API.