BEbenchling
AA Monomer

Update AaMonomer

Update AaMonomer.

patch/api/v3/aa-monomer/{aa_monomer_id}

Request

  • Base URL
    https://{tenant_name}.benchling.com
  • Auth
    HTTP bearer

Path parameters

aa_monomer_idstring required

ID of the AaMonomer.

Headers

EARLY-ACCESSstring

Set to true to access beta operations via /api/v3.

Request body

archiveReasonstring

Why it is being archived. Required when archived is true, and not allowed when unarchiving.

archivedboolean

Set to true to archive or false to unarchive it. Archiving requires archiveReason.

customMolecularWeightnumber double nullable

Optional molecular weight value that the user can provide to override the calculated value.

namestring
symbolstring

User-defined identifier of the monomer, unique per tenant.

Response

OK

__typenamestring
archiveReasonstring nullable
archivedboolean
attachmentPointsAaMonomerAttachmentPointsItems[]

The capping groups present at each attachment point where the monomer bonds to other monomers.

calculatedMolecularWeightnumber double

The molecular weight of the monomer with capping groups removed, computed using the average atomic weights of each element weighted by natural isotopic frequency.

canonicalSmilesstring

The SMILES representation of the chemical structure after being standardized.

createdAtstring datetime
customMolecularWeightnumber double nullable

Optional molecular weight value that the user can provide to override the calculated value.

exactMolecularWeightnumber double

The exact (monoisotopic) molecular weight of the monomer with capping groups removed, computed using the atomic weight of the most frequent isotope of each element.

idstring
isNaturalboolean

Whether this monomer represents a natural (unmodified) amino acid, as opposed to a modified or synthetic variant.

modifiedAtstring datetime
molfilestring

The molfile representation of the chemical structure.

namestring
naturalAnalog'A' | 'B' | 'C' | 'D' | 'E' | 'F' | 'G' | 'H' | 'I' | 'J' | 'K' | 'L' | 'M' | 'N' | 'O' | 'P' | 'Q' | 'R' | 'S' | 'T' | 'U' | 'V' | 'W' | 'X' | 'Y' | 'Z'

The standard amino acid single-letter code that this monomer is an analog of.

originalSmilesstring nullable

The SMILES string that was originally provided upon creation. Null if the user did not originally provide SMILES.

symbolstring

User-defined identifier of the monomer, unique per tenant.

Changes

No recorded changes to this operation across all 1 revision of this API.