import {z} from 'zod' export type GetApiPreprocessingDatabasesOptions = {baseUrl: string, fetch?: typeof fetch | undefined}; export const referenceDBSummarySchema = z.object({exists: z.boolean(), file_path: z.string(), file_size_bytes: z.number().int().optional(), file_size_human: z.string().optional(), last_modified: z.string().nullable().optional(), tables: z.array(z.string()).optional(), total_rows: z.number().int().optional()}); export const sourceStatusSchema = z.object({exists: z.boolean(), path: z.string(), files_found: z.number().int().optional(), files_expected: z.number().int().optional(), total_size_bytes: z.number().int().optional(), total_size_human: z.string().optional(), oldest_file_modified: z.string().nullable().optional(), newest_file_modified: z.string().nullable().optional()}); export const conversionMetadataSchema = z.object({start_time: z.string().nullable().optional(), elapsed_seconds: z.number().nullable().optional(), elapsed_human: z.string().nullable().optional(), successful_chromosomes: z.number().int().nullable().optional(), failed_chromosomes: z.number().int().nullable().optional()}); export const parquetStatusSchema = z.object({exists: z.boolean(), path: z.string(), partitions: z.number().int().optional(), partitions_expected: z.number().int().optional(), total_size_bytes: z.number().int().optional(), total_size_human: z.string().optional(), last_modified: z.string().nullable().optional(), row_count: z.number().int().nullable().optional(), conversion_metadata: conversionMetadataSchema.nullable().optional()}); export const referenceDBTableSchema = z.object({loaded: z.boolean(), table_name: z.string(), row_count: z.number().int().nullable().optional(), column_count: z.number().int().nullable().optional()}); export const freshnessSchema = z.object({status: z.string(), message: z.string(), source_age_days: z.number().int().nullable().optional(), parquet_age_days: z.number().int().nullable().optional(), cache_ttl_days: z.number().int().nullable().optional(), is_within_ttl: z.boolean().nullable().optional(), suggested_action: z.string().nullable().optional()}); export const validationSchema = z.object({passed: z.boolean(), checks: z.record(z.string(), z.unknown()).optional()}); export const databaseStatusSchema = z.object({name: z.string(), display_name: z.string(), version: z.string().nullable().optional(), description: z.string().nullable().optional(), priority: z.number().int(), enabled: z.boolean().optional(), license_required: z.boolean().optional(), vep_required: z.boolean().optional(), source_url: z.string().nullable().optional(), source: sourceStatusSchema, parquet: parquetStatusSchema, reference_db: referenceDBTableSchema, freshness: freshnessSchema, validation: validationSchema}); export const allDatabasesStatusResponse = z.object({reference_db: referenceDBSummarySchema, databases: z.array(databaseStatusSchema)}); export const validateResponse = async ( schema: { readonly '~standard': { readonly validate: (value: unknown) => ({ readonly value: Output; readonly issues?: undefined } | { readonly issues: ReadonlyArray<{ readonly message: string; readonly path?: ReadonlyArray | undefined }> }) | Promise<{ readonly value: Output; readonly issues?: undefined } | { readonly issues: ReadonlyArray<{ readonly message: string; readonly path?: ReadonlyArray | undefined }> }> } }, value: unknown ): Promise => { const result = await schema['~standard'].validate(value) if (result.issues !== undefined) { const detail = result.issues .map(({ message, path }) => path?.length ? `${path.map((segment) => String(typeof segment === 'object' ? segment.key : segment)).join('.')}: ${message}` : message ) .join('; ') throw new Error(`Response does not match the schema: ${detail}`, { cause: { issues: result.issues } }) } return result.value }; /** * Get All Databases Status * * GET /preprocessing/databases */ export const getApiPreprocessingDatabases = async (options: GetApiPreprocessingDatabasesOptions) => { const {baseUrl, fetch: fetchFn = fetch} = options ?? {} const query = new URLSearchParams() const headers = new Headers() headers.set('accept', "application/json") const url = `${baseUrl.replace(/\/+$/, '')}/preprocessing/databases${query.size > 0 ? `?${query}` : ''}` const res = await fetchFn(url, {method: "GET", headers}) if (!res.ok) throw new Error(`Request failed with status ${res.status}`, {cause: {status: res.status, body: await res.text()}}) return validateResponse(allDatabasesStatusResponse, await res.json()) };