---
title: "List NucleotideAlignment items"
method: GET
path: "/api/v3/rna-sequence/{rna_sequence_id}/nucleotide-alignments/items"
tags: ["RNA Sequence"]
---

# List NucleotideAlignment items

`GET /api/v3/rna-sequence/{rna_sequence_id}/nucleotide-alignments/items`

## Request

- Base URL: `https://{tenant_name}.benchling.com`
- URL: `https://{tenant_name}.benchling.com/api/v3/rna-sequence/{rna_sequence_id}/nucleotide-alignments/items`
- Auth: HTTP bearer

List NucleotideAlignment items.

## Path parameters

- `rna_sequence_id` string, required

## Query parameters

- `createdAt.gt` string, datetime
- `createdAt.gte` string, datetime
- `createdAt.lt` string, datetime
- `createdAt.lte` string, datetime
- `id.anyOf` string[]
- `modifiedAt.gt` string, datetime
- `modifiedAt.gte` string, datetime
- `modifiedAt.lt` string, datetime
- `modifiedAt.lte` string, datetime
- `name.anyOf` string[]
- `name.anyOf.caseSensitive` string[]
- `nextToken` string
- `pageSize` integer
- `sequenceIds.anyOf` string[]
- `sort` 'createdAt:asc' | 'createdAt:desc' | 'modifiedAt:asc' | 'modifiedAt:desc'

## Response `200`

OK

- NucleotideAlignmentPaginatedList
  - `items` NucleotideAlignment[]
    - `__typename` string
    - `alignedNucleotideSequences` string, uri: The individual sequence rows in the alignment, including the reference sequence and each aligned read or input sequence. Each row contains the gapped bases and trim boundaries that define the high-quality region used for alignment and pairwise identity calculations.
    - `alignmentType` 'TEMPLATE' | 'CONSENSUS': The type of the Alignment, whether it is a consensus or template alignment.
    - `createdAt` string, datetime: DateTime the Alignment was created.
    - `id` string: The ID of the Alignment.
    - `modifiedAt` string, datetime: DateTime the Alignment was last modified.
    - `name` string: The name of the Alignment.
    - `referenceSequence` NucleotideSequenceRef
      - `__typename` string
      - `id` string, api_id
  - `nextToken` string, nullable

## Other responses

- `400`: Bad Request
- `403`: Forbidden
- `404`: Not Found
- `429`: Too Many Requests
- `500`: Internal Server Error

---

[API](https://skmtc.dev/benchling/apis/benchling-api.md) - [All operations](https://skmtc.dev/benchling/apis/benchling-api/llms.txt) - [OpenAPI document](https://skmtc.dev/benchling/apis/benchling-api/revisions/c9f087b98b8b?raw)